紫花槭秋季叶色表达转录组初步分析     

张佳奇  赵东辉  高玉福  荣立苹  李佳霖  翁卓 《分子植物育种》2021,19(21):7075-7083

为了丰富紫花槭转录组数据,进一步开展紫花槭秋季叶片呈色机制研究.本研究以紫花槭秋季转色期三个阶段(前期,中期,后期)叶片为材料,采用高通量测序技术进行转录组初步分析.转录组数据共获得50501条Unigene,有35316条Unigene在数据库中得到注释,其中NR数据库中注释到的Unigene数量最多,共35024条,占69.4％.在注释到的物种中,紫花槭比对的Unigene与甜橙(Citrus sinensis)相似度最高,共有4290条,占12.25％.紫花槭转录组中的Unigene根据GO功能可分为生物学过程、细胞组分和分子功能3大类,共有25375条,其中生物学过程的基因最多,主要聚集于代谢过程和细胞过程等.基于Unigene库的基因结构分析,其中SSR分析共获得12711个SSR标记,占Unigene总数的36％.SSR位点共包含150种重复基元,单碱基重复所占比例最高(7184个,61.86％),四碱基重复、五碱基重复和六碱基重复所占比例较低.Unigene库中共有328239个SNP位点,发生频率为1/190 bp,SNP位点分为转换和颠换两种类型的碱基替换方式,其中碱基转换位点213787个(65.13％),碱基颠换位点114452个(34.87％),碱基转换类型发生频率高于颠换类型.6种单碱基变异中,2种转换类型A/G、C/T的发生频率分别为33.03％和32.10％;4种颠换类型中A/T发生频率最高,为11.52％;C/G发生频率最低,为5.79％.紫花槭转录组秋季叶色表达的转录组分析,可为紫花槭叶色基因调控、定向分子育种和培育彩叶新品种提供研究提供基础的数据信息.  相似文献   

花生栽野种间杂交异源多倍化早期世代基因表达变化分析     

高忠奎  熊发前  韩柱强  蒋菁  黄志鹏  唐秀梅  吴海宁  钟瑞春  刘菁  唐荣华  贺梁琼 《分子植物育种》2020,(6):1867-1875

为了进一步认识花生种间杂交异源多倍体进化过程中的基因表达变化规律,采用cDNA-HFO-TAG技术,研究花生种间杂交组合(四倍体栽培种‘仲恺花4号’×二倍体野生种Arachis. diogio)杂种F_1和早期多倍体世代S0~S3的基因表达变化情况。14条HFO-TAG引物共扩增出121条cDNA片段,其中差异片段84个,主要包括三种类型:亲本转录物完全沉默(3个),双亲转录物在后代部分材料中沉默(59个)和新转录物激活(22个),上述变化在F1代即开始发生。筛选其中大小为500~2 000 bp的35个TDFs进行克隆测序,有27个和NCBI数据库中已录入的基因具有较高的相似性,包括抗逆相关基因(10条)、未知功能蛋白基因(8条)、能量与代谢相关基因(7条)和转录因子相关的基因(2条)。这些研究结果进一步表明在花生种间杂交异源多倍化早期发生着快速、剧烈的基因表达变化,从中获得的差异基因片段,有助于了解花生属种间杂交异源多倍化早期分子机制变化,这对有效利用野生花生种质优异基因具有重要意义。cDNA-HFO-TAG技术简单、有效且实用,完全适用于花生属基因表达变化研究,可以作为花生属及其它物种基因表达变化分析技术的有效补充。  相似文献   

Development of a core set of KASP markers for assaying genetic diversity in Brassica rapa subsp. chinensis Makino     

Peirong Li  Tongbing Su  Huiping Wang  Xiuyun Zhao  Weihong Wang  Yangjun Yu  Deshuang Zhang  Changlong Wen  Shuancang Yu  Fenglan Zhang 《Plant Breeding》2019,138(3):309-324

Single‐nucleotide polymorphisms (SNPs) are rapid, economical and reliable genotyping tools. Non‐heading Chinese cabbage (Brassica rapa L. subsp. chinensis Makino) is now an economically important vegetable crop worldwide. In this study, 1,167 SNPs were evaluated for 7polymorphism among 70 representative non‐heading Chinese cabbage inbred lines using a Kompetitive Allele Specific PCR (KASP) genotyping assay. On the basis of identified polymorphisms and the results of a principal component analysis, we selected 50 core SNPs that were balanced sufficiently to provide adequate information for genetic identification. The core SNPs were used for construction of a neighbour‐joining dendrogram that separated the 70 inbred lines into four main groups and several subgroups corresponding to Caixin, Heiyebaicai, Huangxinwu, Naibaicai, Taitsai, Pak‐choi, and Wutatsai. This categorization was superior to that achieved using a dataset of 479 polymorphic SNPs. To confirm the utility of the core SNP markers in genetic identification, we tested their stability and resolution using 162 commercial hybrid cultivars. The SNPs, which represent a cost‐effective, accurate marker set for germplasm analysis and cultivar identification, are suitable for molecular marker‐assisted breeding in non‐heading Chinese cabbage.  相似文献   

茶树几丁质酶基因的克隆及其在干旱胁迫下的表达分析在干旱胁迫下的表达分析     

朱晨  张舒婷  常笑君  赵姗姗  王仲  许长同  张梓浩  林玉玲  赖钟雄  郭玉琼 《热带作物学报》2017,38(5):894-902

以铁观音茶树叶片为材料,利用逆转录PCR及RACE法,克隆了茶树几丁质酶基因CsChi(GenBank登录号为KR078345).CsChi基因的cDNA全长为1 192 bp,包含972 bp的开放阅读框(ORF),编码323个氨基酸.生物信息学分析结果表明,CsChi蛋白的分子量为34.33 ku;理论等电点pI为8.44;原子组成为C1519H2285N413O464S18,总原子数为4 699;蛋白质结构分析显示该蛋白有6个蛋白的跨膜区域,属于跨膜蛋白;存在于细胞外;没有卷曲螺旋结构存在;CsChi基因编码的蛋白属于糖苷水解酶19家族,含有保守的ChtBD1结构域,与溶菌酶的保守结构域类似,可能兼具几丁质酶活性和溶菌酶活性,qPCR定量分析结果显示在不同干旱胁迫处理下茶树的CsChi基因的表达量,与对照组相比有所增加.推测CsChi基因在茶树干旱等逆境胁迫中起重要作用.  相似文献   

河北省棉田绿盲蝽绿色防控技术体系构建     

安静杰  李耀发  党志红  张涛  高占林  高连珍  霍成梅  潘文亮 《中国棉花》2017,44(5):20-22

为了构建科学合理、可操作性强的河北省棉田绿盲蝽绿色防控技术体系，于2011－2015年在河北省沧州植棉区开展了棉田绿盲蝽绿色防控技术研究，包括色板诱杀、性信息素、频振式杀虫灯和高效生物农药应用等，并逐步构建了针对棉田绿盲蝽的绿色防控技术体系。根据相关研究发现，该绿色防控技术对棉田绿盲蝽有较好的防治效果，与常规防治区相比，减药控害成果显著。  相似文献   

乡村振兴人才队伍建设存在的问题与对策研究   总被引：1，自引：1，他引：0  

唐语琪  那晴  尹俊梅  徐兵强  李旭妍 《农业科研经济管理》2020,(2):41-43

党的十九大提出了乡村振兴战略，人才振兴是乡村振兴的关键。目前乡村人才队伍存在总体规模偏少、整体素质偏低、后备力量不足等问题。文章结合这些实际问题，提出相应的对策建议，以期助力乡村振兴人才队伍建设。  相似文献   

橡胶园酸性、中性土壤交换性钙、镁测定方法研究     

许木果  丁华平  刘忠妹  陈桂良  陈永川  黎小清 《中国农学通报》2020,36(18):73-79

为了获得简单、易操作、准确度高的橡胶园酸性、中性土壤交换性钙、镁测定方法,本试验通过响应面优化试验,建立称样量、提取液体积、提取方式与交换性钙测定结果之间的数学模型。结果表明：在25℃条件下,以1 mol/L的乙酸铵为土壤浸提液,称样量为2 g、提取液体积175 mL、振荡36 min,为橡胶园酸性、中性土壤的最佳提取条件。将上述条件下得到的结果与标准方法条件下得到的结果相对比,两结果的相对误差在1.25~3.04之间,均属合理范围。利用标准样品对优化方法进行试验验证,结果与推荐值相符。改进后的方法分析成本低、操作简便、测定结果准确、稳定性好,可用于橡胶园酸性、中性土壤交换性钙、镁的测定。  相似文献   

Differential regulation on C5 expression in goose versus mammals by glucose/palmitate provides a potential protection for goose fatty liver     

Zidi Jin  Long Liu  Cheng Xu  Chunchi Yan  Shuo Li  Tuoyu Geng  Daoqing Gong 《Animal Science Journal》2021,92(1):e13672

Goose fatty liver is a specific type of nonalcoholic fatty liver that is protected from harmful effects associated with severe steatosis. Our previous findings suggest that suppression of the complement C5 may be relevant, but the mechanism is unclear. Therefore, in this study, we first verified the expression pattern of complement genes (including C5) during goose fatty liver formation and then determined the liver fat content and fatty acid composition by high-performance liquid chromatography (HPLC), followed by selecting the differential metabolites to treat HepG2, goose and mouse primary hepatocytes, aiming to explore the mechanism of C5 and inflammation suppression in goose fatty liver. The data confirmed the suppression of complement genes (including C5) in goose fatty livers. Moreover, fat content was significantly higher in fatty liver versus normal ones, with oleic acid and palmitic acid dominantly accounting for the difference. In line with this, high concentration of palmitate led to down regulation of C5 expression in goose primary hepatocytes whereas upregulation in mouse primary hepatocytes and HepG2 cells. In conclusion, regulation on C5 expression by fatty liver related factors including high level of palmitic acid may contribute to the protection of goose liver from severe hepatic steatosis.  相似文献   

棉花叶枝数与种植密度对单株结铃数的影响   总被引：1，自引：1，他引：0  

朱继杰  赵红霞  王士杰  李妙  王国印  黄瑞恒  张晓  万艳霞 《中国棉花》2017,44(1):13-16

为了探明棉花叶枝数和密度对单株结铃的影响规律，试验设置5种留叶枝方式：不留叶枝（CK）、留1叶枝、留2叶枝、留3叶枝、留全部叶枝；5个种植密度（万株·hm^－2）：2.25，3.00，3.75，4.50，5.25。研究结果表明：在同一密度条件下，随叶枝的增多，单株铃数增加；留1叶枝单株铃数较对照增加10%左右，留2、3叶枝单株铃数较对照增加15%左右，保留全部叶枝较对照增加25%左右。在同一叶枝处理下，随密度的增加，单株铃数减少；密度每增加7500株·hm^－2，5种留叶枝方式的单株结铃分别减少2.60个、3.04个、3.06个、3.44个和3.71个。总铃数随叶枝和密度的增加而增加，当总成铃为88.24万个·hm^－2时产量最高。  相似文献   

Effects of Feeding Frequency on Apparent Energy and Nutrient Digestibility/Availability of Channel Catfish,Ictalurus punctatus,Reared at Optimal and Suboptimal Temperatures          下载免费PDF全文

Menghe H. Li  Penelope M. Lucas 《Journal of the World Aquaculture Society》2017,48(1):132-136

This study examined the effects of feeding frequency (daily versus every other day [EOD]) on nutrient digestibility/availability of channel catfish, Ictalurus punctatus, reared at optimal (30 C) and suboptimal (24 C) temperatures. A 28% protein practical diet was used as the test diet, and chromic oxide was used at 0.75% of the diet as a maker. Twenty channel catfish of a mean weight of 141 g/fish were stocked into 12 flow‐through aquaria (110 L). Fish were fed daily or EOD to apparent satiation for 7 d before fecal samples were collected by the dissection method. Fish fed EOD to apparent satiation consumed more diet on days fed than those fed daily, and fish reared at 30 C consumed more diet than those reared at 24 C. Neither feeding frequency nor water temperature significantly affected apparent digestibility coefficients for energy and protein and apparent availability coefficients for total amino acids. Results show no advantage by feeding EOD over feeding daily on nutrient digestibility and diet utilization efficiency.  相似文献